Megalodon was no cold-blooded killer

The largest marine predator that ever lived was no cold-blooded killer.

Well, a killer, yes. But a new analysis by environmental scientists from UCLA, UC Merced and William Paterson University sheds light on the warm-blooded animal’s ability to regulate its body temperature — and might help explain why it went extinct.

After analyzing isotopes in the tooth enamel of the ancient shark, which went extinct about 3.6 million years ago, the scientists concluded the megalodon could maintain a body temperature that was about 13 degrees Fahrenheit (about 7 degrees Celsius) warmer than the surrounding water.

That temperature difference is greater than those that have been determined for other sharks that lived alongside the megalodon and is large enough to categorize megalodons as warm-blooded.

The paper, published in Proceedings of the National Academy of Sciences, suggests that the amount of energy the megalodon used to stay warm contributed to its extinction. And it has implications for understanding current and future environmental changes.

“Studying the driving factors behind the extinction of a highly successful predatory shark like megalodon can provide insight into the vulnerability of large marine predators in modern ocean ecosystems experiencing the effects of ongoing climate change,” said lead researcher Robert Eagle, a UCLA assistant professor of atmospheric and oceanic sciences and member of the UCLA Institute of the Environment and Sustainability.

Megalodons, which are believed to have reached lengths up to 50 feet, belonged to a group of sharks called mackerel sharks — members of that group today include the great white and thresher shark. While most fish are cold-blooded, with body temperatures that are the same as the surrounding water, mackerel sharks keep the temperature of all or parts of their bodies somewhat warmer than the water around them, qualities called mesothermy and regional endothermy, respectively.

Sharks store heat generated by their muscles, making them different from fully warm-blooded or endothermic animals like mammals. In mammals, a region of the brain called the hypothalamus regulates body temperature.

Various lines of evidence have hinted that megalodon might have been mesothermic. But without data from the soft tissues that drive body temperature in modern sharks, it has been difficult to determine if or to what extent megalodon was endothermic.

In the new study, the scientists looked for answers in the megalodon’s most abundant fossil remains: its teeth. A main component of teeth is a mineral called apatite, which contains atoms of carbon and oxygen. Like all atoms, carbon and oxygen can come in “light” or “heavy” forms known as isotopes, and the amount of light or heavy isotopes that make up apatite as it forms can depend on a range of environmental factors. So the isotopic composition of fossil teeth can reveal insights about where an animal lived and the types of foods it ate, and — for marine vertebrates — information like the chemistry of the seawater where the animal lived and the animal’s body temperature.

“You can think of the isotopes preserved in the minerals that make up teeth as a kind of thermometer, but one whose reading can be preserved for millions of years,” said Randy Flores, a UCLA doctoral student and fellow of the Center for Diverse Leadership in Science, who worked on the study. “Because teeth form in the tissue of an animal when it’s alive, we can measure the isotopic composition of fossil teeth in order to estimate the temperature at which they formed and that tells us the approximate body temperature of the animal in life.”

Because most ancient and modern sharks are unable to maintain body temperatures significantly higher than the temperature of surrounding seawater, the isotopes in their teeth reflect temperatures that deviate little from the temperature of the ocean. In warm-blooded animals, however, the isotopes in their teeth record the effect of body heat produced by the animal, which is why the teeth indicate temperatures that are warmer than the surrounding seawater.

The researchers hypothesized that any difference between the isotope values of the megalodon and those of other sharks that lived at the same time would indicate the degree to which the megalodon could warm its own body.

The researchers collected teeth from the megalodon and other shark contemporaries from five locations around the world, and analyzed them using mass spectrometers at UCLA and UC Merced. Using statistical modeling to estimate sea water temperatures at each site where teeth were collected, the scientists found that megalodons’ teeth consistently yielded average temperatures that indicated it had an impressive ability to regulate body temperature.

Its warmer body allowed megalodon to move faster, tolerate colder water and spread out around the world. But it was that evolutionary advantage that might have contributed to its downfall, the researchers wrote.

The megalodon lived during the Pliocene Epoch, which began 5.33 million years ago and ended 2.58 million years ago, and global cooling during that period caused sea level and ecological changes that the megalodon did not survive.

“Maintaining an energy level that would allow for megalodon’s elevated body temperature would require a voracious appetite that may not have been sustainable in a time of changing marine ecosystem balances when it may have even had to compete against newcomers such as the great white shark,” Flores said.

Project co-leader Aradhna Tripati, a UCLA professor of Earth, planetary and space sciences and a member of the Institute of Environment and Sustainability, said the scientists now plan to apply the same approach to studying other species.

“Having established endothermy in megalodon, the question arises of how frequently it is found in apex marine predators throughout geologic history,” she said.

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UK’s high rate of avoidable deaths linked to NHS woes

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She helped kill Roe v Wade – now she wants to end abortion in America

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Vaping: E-cigarettes have ruined my life, woman says

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Do warmer temperatures make turtles better mothers?

Warmer temperatures are known to make more turtle eggs become female hatchlings, but new research out of Duke University shows that those females also have a higher capacity for egg production, even before their sex is set.

This finding may explain why many animals besides turtles have temperature-dependent sex determination and why the system persists, despite seeming like a risky strategy. It may also provide a troubling glimpse of what could lie ahead in a warming world.

What the researchers found, as published June 23 the journal Current Biology, is that the number of “germ cells” — pre-eggs — that an embryo carries is increased by higher incubation temperatures. In fact, they found that those germ cells themselves play a role in the embryo becoming female.

“Sex determination by temperature isn’t just one mechanism,” said senior author Blanche Capel, the James B. Duke Distinguished Professor of Cell Biology in the Duke School of Medicine. “Higher temperatures seem to affect sex determination in incremental ways through multiple cell types in the embryo.”

The more abundant germ cells themselves seem to drive feminization, said Boris Tezak, a postdoctoral researcher in the Capel lab who led this project. “The temperatures that produce females are also the temperatures that increase germ cell number,” he said.

Higher numbers of germ cells are known to control female development in fish as well, Capel said. But to prove the point that more germ cells lead to female turtles, they removed some germ cells from red-eared slider embryos raised at an intermediate temperature that should have yielded 50-50 proportions, and saw more males than expected.

Scientists have known about temperature-dependent sex development for decades and have found it in many different parts of the tree of life, apparently because it evolved multiple times in multiple ways.

“It popped up everywhere,” Tezak said. “It seems like a really risky strategy, especially in the context of weather variations and climate change, so why would this system persist?”

They think it’s because temperature-dependent sex development creates a reproductive advantage.

“A female that hatches with more germ cells is presumably more reproductively fit — it increases her reproductive potential to carry more eggs,” Tezak said. “We’ve linked the female pathway to the increased number of germ cells, and if that does make her more reproductively fit, that would go a long way toward explaining why temperature-dependent sex development persists.”

As global temperatures continue to rise, the question becomes: what will happen to the turtles and other temperature-sensitive breeders? “We’ll be looking at how further increases in temperature will affect the pool of germ cells,” Tezak said. “Will it produce less-fit females?”

To answer these questions, Tezak carefully nurtures clutches of red-eared slider eggs obtained from a Louisiana breeder in plastic boxes filled with moist medium and kept at a constant temperature in the lab. One incubator runs at 26 degrees Celsius, producing more males. Another is at 31 degrees, the optimum temperature for producing more females.

When he takes out one of each to check on their progress with a very bright light, the embryo that was incubated warmer is markedly larger and more active inside the egg.

“We are hypothesizing that there’s a temperature ‘sweet-spot,'” Capel said. “There is a short range where you get a large number of germ cells, and beyond that you start to see declines,” Capel said.

“We have incubated some eggs at 33.5 degrees, only two and a half degrees higher than the optimal temperature for females,” Tezak said. “It created some really wonky embryos — there were cyclops and two-headed embryos. We haven’t counted their germ cells yet.”

The lab is also about to take delivery on some alligator eggs to continue the temperature experiments. Alligators are known to produce females at low temperatures and males at high temperatures, the opposite pattern from the red-eared slider turtle. However, the low temperature in alligators is the same as the high temperature in turtles, so both species produce females at 31 degrees Celsius. “The interesting question is whether we see more germ cells in both species at this temperature,” Tezak said.

Funding for this study was provided by the U.S. National Science Foundation (1854642) and the Czech Science Foundation (23-07658S).

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Extinct warbler’s genome sequenced from museum specimens

The Bachman’s warbler, a songbird that was last seen in North America nearly 40 years ago, was a distinct species and not a hybrid of its two living sister species, according a new study in which the full genomes of seven museum specimens of the bird were sequenced. Genome comparisons of Bachman’s warbler with the golden-winged and blue-winged warblers also helped researchers identify a new candidate gene involved in feather pigmentation in the group. A paper describing the study, led by Penn State researchers, highlights the crucial role that museum collections can play in science and appears June 16, 2023 in the journal Current Biology.

“The Bachman’s warbler is the only songbird known to have recently gone extinct in North America,” said David Toews, assistant professor of biology in the Penn State Eberly College of Science and the leader of the research team. “It is one of three species in the genus Vermivora. Our lab studies the two living species of this genus, which are known to mate with each other producing hybrid offspring.”

Golden-winged and blue-winged warblers produce a spectrum of hybrids, but two distinct types of hybrid offspring, each with a unique combination of the parent species’ coloration, have been the focus of bird watchers and ornithologists. This is because these two hybrids were thought to be distinct species themselves, known as Brewster’s warbler and Lawrence’s warbler, until careful study of wild hybrids and, now, modern genetic analysis has confirmed their hybrid origins. The extinct Bachman’s warbler resembles one of these hybrid offspring in coloration, so there was some question as to whether the Bachman’s warbler was itself a distinct species or if it might also have been a hybrid.

The research team collected seven specimens of the Bachman’s warbler from museum collections and extracted DNA from the birds’ toepads. They then performed whole-genome sequencing to compare the Bachman’s warbler genome to existing genomes for the two living species in the genus.

“It’s never easy to get DNA for sequencing from museum specimens,” said Andrew Wood, the first author of the paper, who was a research technologist in Toews’ lab at the time of the research and is now a postdoctoral researcher at the University of Minnesota. “These birds were collected over a hundred years ago and were not preserved in any special way, but we were able to extract enough DNA to get genome sequences that are comparable to those from the living species.”

The genomes of the golden-winged and blue-winged warblers are very similar to each other, except for a few regions that are involved in determining the coloration patterns of the bird’s feathers. In comparison, the Bachman’s warbler genome was very different, which indicated to the researchers that it was, in fact, a distinct species.

“We only have a small sample size for the Bachman’s warbler genome, but one of the interesting findings we saw by comparing the seven specimens was that there were long ‘runs of homozygosity,'” said Toews. “These are regions of the genome where the two copies of the genome — one inherited from each parent — are identical to each other and is an indication that the population may have been small and there was a lot of inbreeding. We see similar patterns in the living species, so understanding if this might have contributed to the extinction of Bachman’s warbler could help us to better understand the health and conservation of the living population.”

The researchers also compared the genomes of the three species to look for regions of the genome that may have evolved differently in each lineage. These differences can be indicators that a particular region of the genome evolved via natural selection for a particular trait or because of another evolutionary process. Having a third species’ genome to compare allowed the researchers to identify a region that contained a new candidate gene involved in warbler pigmentation.

“We began this study because we were interested in learning about the history and biology of Bachman’s warbler,” said Woods. “But our results also highlighted how we can use extinct species to learn about their living relatives. We lose a lot of biological and evolutionary context through the process of extinction and being able to compare Bachman’s warbler to the two living species allowed us to identify a gene that we might not have otherwise found. Context is crucial to understanding biology. Natural history collections allow us to place new observations into contexts that may have disappeared from the natural world. This fuels discovery, and makes museums powerful, and underappreciated, tools.”

In addition to Toews and Wood, the research team includes Zachary A. Szpiech, assistant professor of biology at Penn State; Irby J. Lovette at the Cornell Lab of Ornithology; and Brian Tilston Smith at the American Museum of Natural History in New York. The research was funded by the U.S. National Science Foundation, the Huck Institutes of the Life Sciences at Penn State, and the Penn State Eberly College of Science. Computations were performed using the Penn State’s Institute for Computational Data Sciences’ Roar supercomputer.

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A subtype of depression identified

Scientists at Stanford Medicine conducted a study describing a new category of depression — labeled the cognitive biotype — which accounts for 27% of depressed patients and is not effectively treated by commonly prescribed antidepressants.

Cognitive tasks showed that these patients have difficulty with the ability to plan ahead, display self-control, sustain focus despite distractions and suppress inappropriate behavior; imaging showed decreased activity in two brain regions responsible for those tasks.

Because depression has traditionally been defined as a mood disorder, doctors commonly prescribe antidepressants that target serotonin (known as selective serotonin reuptake inhibitors or SSRIs), but these are less effective for patients with cognitive dysfunction. Researchers said that targeting these cognitive dysfunctions with less commonly used antidepressants or other treatments may alleviate symptoms and help restore social and occupational abilities.

The study, published June 15 in JAMA Network Open, is part of a broader effort by neuroscientists to find treatments that target depression biotypes, according to the study’s senior author, Leanne Williams, PhD, the Vincent V.C. Woo Professor and professor of psychiatry and behavioral sciences.

“One of the big challenges is to find a new way to address what is currently a trial-and-error process so that more people can get better sooner,” Williams said. “Bringing in these objective cognitive measures like imaging will make sure we’re not using the same treatment on every patient.”

Finding the biotype

In the study, 1,008 adults with previously unmedicated major depressive disorder were randomly given one of three widely prescribed typical antidepressants: escitalopram (brand name Lexapro) or sertraline (Zoloft), which act on serotonin, or venlafaxine-XR (Effexor), which acts on both serotonin and norepinephrine. Seven hundred and twelve of the participants completed the eight-week regimen.

Before and after treatment with the antidepressants, the participants’ depressive symptoms were measured using two surveys — one, clinician-administered, and the other, a self-assessment, which included questions related to changes in sleep and eating. Measures on social and occupational functioning, as well as quality of life, were tracked as well.

The participants also completed a series of cognitive tests, before and after treatment, measuring verbal memory, working memory, decision speed and sustained attention, among other tasks.

Before treatment, scientists scanned 96 of the participants using functional magnetic resonance imaging as they engaged in a task called the “GoNoGo” that requires participants to press a button as quickly as possible when they see “Go” in green and to not press when they see “NoGo” in red. The fMRI tracked neuronal activity by measuring changes in blood oxygen levels, which showed levels of activity in different brain regions corresponding to Go or NoGo responses. Researchers then compared the participants’ images with those of individuals without depression.

The researchers found that 27% of the participants had more prominent symptoms of cognitive slowing and insomnia, impaired cognitive function on behavioral tests, as well as reduced activity in certain frontal brain regions — a profile they labeled the cognitive biotype.

“This study is crucial because psychiatrists have few measurement tools for depression to help make treatment decisions,” said Laura Hack, MD, PhD, the lead author of the study and an assistant professor of psychiatry and behavioral sciences. “It’s mostly making observations and self-report measures. Imaging while performing cognitive tasks is rather novel in depression treatment studies.”

Pre-treatment fMRI showed those with the cognitive biotype had significantly reduced activity in the dorsolateral prefrontal cortex and dorsal anterior cingulate regions during the GoNoGo task compared with the activity levels in participants who did not have the cognitive biotype. Together, the two regions form the cognitive control circuit, which is responsible for limiting unwanted or irrelevant thoughts and responses and improving goal selection, among other tasks.

After treatment, the researchers found that for the three antidepressants administered, the overall remission rates — the absence of overall depression symptoms — were 38.8% for participants with the newly discovered biotype and 47.7% for those without it. This difference was most prominent for sertraline, for which the remission rates were 35.9% and 50% for those with the biotype and those without, respectively.

“Depression presents in different ways in different people, but finding commonalities — like similar profiles of brain function — helps medical professionals effectively treat participants by individualizing care,” Williams said.

Depression isn’t one size fits all

Williams and Hack propose that behavior measurement and imaging could help diagnose depression biotypes and lead to better treatment. A patient could complete a survey on their own computer or in the doctor’s office, and if they are found to display a certain biotype, they might be referred to imaging for confirmation before undergoing treatment.

Researchers at the Stanford Center for Precision Mental Health and Wellness, which Williams directs, in partnership with the Stanford Translational Precision Mental Health Clinic, which Hack directs, are studying another medication — guanfacine — that specifically targets the dorsolateral prefrontal cortex region with support from Stanford University Innovative Medicines Accelerator. They believe this treatment could be more effective for patients with the cognitive subtype.

Williams and Hack hope to conduct studies with participants who have the cognitive biotype, comparing different types of medication with treatments such as transcranial magnetic stimulation and cognitive behavioral therapy. In transcranial magnetic stimulation, commonly referred to as TMS, magnetic fields stimulate nerve cells; in cognitive behavioral therapy, patients are taught to use problem-solving strategies to counter negative thoughts that contribute to both emotional dysregulation and loss of social and occupational abilities.

“I regularly witness the suffering, the loss of hope and the increase in suicidality that occurs when people are going through our trial-and-error process,” Hack said. “And it’s because we start with medications that have the same mechanism of action for everyone with depression, even though depression is quite heterogeneous. I think this study could help change that.”

Researchers from the Sierra-Pacific Mental Illness Research, Education and Clinical Center; the Veterans Affairs Palo Alto Health Care System; Brain Dynamic Centre, Westmead Institute for Medical Research; and the University of Sydney, Westmead, contributed to the work.

The study was funded through Brain Resource Company Operations Pty Ltd. and Stanford University’s Clinical and Translation Science Award Program overseen by the National Center for Advancing Translational Sciences at the National Institutes of Health (grant UL1TR003142-01).

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21st century economic growth will be slower than we thought

The global economy will grow slower in the 21st century than economists have expected, a finding that has implications for our ability to adapt to climate change in the coming decades, according to new research.

A new study projecting the economic futures of four income groups of countries over the next century finds growth will be slower than predicted, with developing countries taking longer to close the wealth gap and approach the income of wealthier nations. What economists have thought of as a worst-case scenario for global economic growth may, in fact, be a best-case scenario, according to the new study published today in Communications Earth & Environment.

The findings suggest governments need to start planning for slower growth and wealthier countries may need to help lower-income nations finance climate change adaptations in the coming decades, according to the study authors.

“We’re at a point where we maybe need to significantly increase financing for [climate] adaptation in developing countries, and we’re also at a point where we might be overestimating our future ability to provide that financing under the current fiscal paradigm,” said Matt Burgess, a CIRES fellow, director of the Center for Social and Environmental Futures, and assistant professor of environmental studies at CU Boulder who led the new study.

“We can now start to winnow down the range of possibilities and move forward in more tangible ways,” said Ryan Langendorf, a postdoctoral scholar at CU Boulder and co-author of the new study.

In the new study, Burgess and his colleagues used two economic models to project how much the global economy will grow over the next century and how quickly developing countries will approach the income levels of wealthier nations.

Both models found the global economy will continue to grow, but that growth will be slower than most economists expected and there will be a larger income gap between wealthier and poorer nations. This means richer countries may need to help finance climate adaptations for poorer countries, and debt-ceiling crises, like what the United States experienced this spring, may become more common.

“Slower growth than we think means higher deficits than we expect, all else equal,” Burgess said. “That means debt would likely become more contentious and important over time, and could mean more frequent debt-ceiling fights.”

Similar to a flight emergency, where individuals should put their own oxygen masks on first, wealthier nations should focus on getting their own financial houses in order so they can be in a position to support lower-income nations in financing climate adaptations, according to the researchers.

“We’re talking about relatively less growth, relatively more inequality, but we’re still talking about a world that is richer than today and more equal across countries than today’s world,” Burgess said.

Still, many wealthy nations are accustomed to growing their way out of debt, but that may not be possible under the new scenario, according to Ashley Dancer, a graduate student at CU Boulder and co-author of the study.

“The next question is: what are some ways that we should be or could be helping [lower-income countries] adapt, if the expectation is that they’re not going to meet the level of wealth that would allow them to do that quickly and aggressively?” Dancer said.

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