In recent years, scientists have used satellite imagery, earthquake data and GPS to search for ground deformation near active volcanoes, but those techniques can be inaccurate in locating the depth of magma storage.

By finding microscopic, carbon dioxide-rich fluids encased in cooled volcanic crystals, scientists can accurately determine — within one hundred meters — where magma is located.

“A fundamental question is where magma is stored in Earth’s crust and mantle,” said Esteban Gazel, professor of engineering and lead author of the study, published in Science Advances. “That location matters because you can gauge the risk of an eruption by pinpointing the specific location of magma, instead of other signals like hydrothermal system of a volcano.”

Gazel notes that speed and precision are essential. “We’re demonstrating the enormous potential of this improved technique in terms of its rapidity and unprecedented accuracy,” he said. “We can produce data within days of the samples arriving from a site, which provides better, near real-time results.”

In volcanic events, magma reaches the Earth’s surface, and it erupts as lava and — depending on how much gas it contains — could be explosive in nature. When deposited as part of the fallout of the eruption, fragmented fine-grained material — called tephra — can be collected and evaluated.

Gazel and doctoral student Kyle Dayton deduced how to use inclusions of carbon dioxide-rich fluids trapped within olivine crystals to precisely indicate depth, as the carbon dioxide density of these inclusions is controlled by pressure.

These fluids can be measured quickly using an instrument to determine — in terms of kilometers — how far down the magma was stored and the depth of the scorching reservoir.

Gazel and Dayton joined a small, elite team of international researchers to study the Cumbre Vieja volcano on La Palma in the Canary Islands. Gazel and Dayton picked through tephra to find crystals, which in turn provide data to improve eruption models and forecasts.

The findings result from a collaboration between the University of Colorado Boulder and three South Africa-based institutions: the University of Venda, Lajuma Research Centre and the conservation organization the Endangered Wildlife Trust (EWT). They take an almost forensic look at what is killing wild animals in South Africa. The country is home to five species of non-human primates, including greater (Otolemur crassicaudatus) and southern lesser (Galago moholis) bushbabies. These primates spend most of their lives in trees, and some are so small they can fit in the palm of your hand.

In one study, scientists led by Birthe Linden at Lajuma analyzed hundreds of cases in which non-human primates had been killed on roads or around power lines across the country. In a companion paper, the researchers explored the growing risks that domestic dogs pose to the animals.

The research shows that the threats facing the world’s monkeys, apes and other non-human primates aren’t always easy to see, particularly for lesser-studied animals like bushbabies.

“Bushbabies, especially, are an example of species that may be having problems, but we don’t know what they are until we go looking,” said Michelle Sauther, co-author of the two studies and professor of anthropology at CU Boulder.

For her, the results border on personal.

In the process of studying bushbabies in South Africa for more than a decade, Sauther and her colleagues got to know one male, in particular — a greater bushbaby with one eye who the team nicknamed Bruiser because he reminded them of an old prize fighter.

Then in 2019 Bruiser, who had bad and missing teeth, tried to move on the ground to reach a fig tree with easy-to-grab fruit. A pet dog found and killed him.

“These are small stories,” Sauther said. “They’re not the big stories of conservation, but they really do matter, especially as we have no good data on bushbaby mortality and thus cannot easily judge their conservation status.”

They’re also small stories that likely touch almost all non-human primate species, not just in South Africa but across the continent.

“We found that all South African non-human primates are in one way or the other impacted by human linear infrastructure, such as power lines or roads,” Linden said.

Roadkill on the rise

Linden, a primatologist from South Africa, first became interested in the hidden dangers facing primates on her almost daily drives to the University of Venda in South Africa’s Soutpansberg Mountains.

She kept seeing samango monkeys (Cercopithecus albogularis) run over on the side of the road. These monkeys are listed in the “Red List of Mammals of South Africa, Swaziland and Lesotho” as “vulnerable,” one step up from “endangered.”

“It’s one stretch where the road is quite close to indigenous forest, which is where samango monkeys typically live,” Linden said.

She wondered if a lot more non-human primates could be dying as roadkill than researchers suspected. South Africa is home to more than 675,000 miles (1,090,000 kilometers) of roads and power lines — and the number keeps climbing.

To explore this pervasive threat, Linden and her colleagues drew from a wide range of data sources. They include Road Watch, a citizen science app released by the EWT that allows anyone in South Africa to upload reports of roadkill. In all, the team gathered 483 examples of primates killed on roads or around power lines, some dating back to the late 1990s. Species included the two bushbabies, samango monkeys, chacma baboons (Papio ursinus) and vervet monkeys (Chlorocebus pygerythrus).

Next up, Frank Cuozzo of the Lajuma Research Centre and a research fellow at the University of Pretoria’s Mammal Research Institute led the group in exploring a different kind of peril: domestic dogs. The researchers tracked down 13 reports of greater bushbabies like Bruiser killed by dogs in South Africa since 2014. In one case, humans intentionally released dogs to hunt down a bushbaby that had gotten too close to town.

“These reports are clearly a sliver of what’s actually happening,” said Cuozzo who earned his doctorate in biological anthropology from CU Boulder in 2000. “It’s happening in the towns and suburban areas, in the rural areas, the reserve areas, and it’s happening far more than anyone would think.”

Why did the monkey cross the road?

The researchers aren’t sure how big of a dent roads, power lines and domestic dogs are making in non-human primate numbers in South Africa or surrounding nations. But they argue that these deaths are important to follow — especially for animals already struggling to survive amid climate change and habitat loss.

Wendy Collinson-Jonker, co-author of the infrastructure study and a researcher at the EWT, noted that these problems are widespread, but the fixes may be surprisingly simple.

Studies have shown, for example, that monkeys and other forest critters can hop across roads safely on “canopy bridges,” such as a rope bridge hanging between trees.

Humans can also keep dogs away from primates by being careful to not leave food out, especially at night.

“We know the solutions,” Collinson-Jonker said. “It’s a case of now getting them implemented.”

As for Bruiser the bushbaby, Sauther noted that his story ended with a small bit of consolation. The team was able to recover his body and collected X-rays that helped reveal a deeper picture of his more than a decade of life — down to the arthritis building up between his joints that likely led him to climb down to the ground.

“We were able to document his whole life story,” Sauther said. “We knew him right to the end.”

That’s the finding of a study by scientists from Penn’s School of Veterinary Medicine, published in the journal Prion. Using feces samples from CWD-positive deer and deer in which CWD was not detected, the researchers trained the dogs to identify the odor of CWD, alerting their handlers to its presence in the lab and in the field.

“We were already quite certain that the dogs could detect the volatile organic compounds released by chronic wasting disease in feces,” says Amritha Mallikarjun, a postdoctoral researcher in Penn Vet’s Working Dog Center and lead author on the study. “Not only did we show this was possible, but we also answered a second, more interesting question, which is, Can they detect the disease in a simulated field setting, as they would if we were using the dogs to find the disease in the landscape of a forest or on a deer farm?”

The dogs indeed could, with enough accuracy to suggest that detection dogs could be a useful strategy in the fight to manage CWD.

“We learned a lot through the study and are now set up well to continue refining our training,” says Cynthia Otto, the senior author on the study and director of the Working Dog Center.

CWD is a disease that affects a variety of deer species, including white-tailed deer, mule deer, and elk. Always fatal and highly contagious, the disease can hide away in an affected animal for a year or two before symptoms manifest: the deer losing weight — “wasting” — and developing neurological signs, like stumbling and drooling. No cure or treatment exists.

The disease has been in Pennsylvania since 2012, and the state has invested significantly in trying to contain it, with several tools in place for keeping tabs on its spread. One hurdle is figuring out which deer are affected. A healthy-looking but infected animal could shed prions, malformed and infectious proteins, for many months or even years before succumbing to the illness. What’s more, prions are known to bind to soil, potentially contaminating the land on which other animals may roam.

The gold-standard diagnostic test can only be performed after death by assessing an affected animal’s brain. Some alternative tests have been trialed that involve taking a biopsy from a potentially infected animal while it’s still alive, but deer are known to be highly stressed by being captured, and collecting these samples can be physically and logistically difficult for the people involved as well.

The Working Dog Center, the Pennsylvania Department of Agriculture, and the Wildlife Futures Program, a partnership between Penn Vet and the Pennsylvania Game Commission, were well positioned to try to contribute an additional technique for managing the disease: dogs and their highly sensitive noses. Ideally, dogs trained to discern CWD-positive from CWD-not-detected feces in a forest or deer farm could help state agencies and private landowners understand whether further testing or management would be needed to keep their land and herds free from the disease.

First, scientists had to prove the dogs could make this distinction reliably. The Working Dog Center began by enlisting three dogs from their citizen science program — Labrador retrievers Charlie and Kiwi and Finnish spitz Jari — to train on the Center’s “scent wheel,” a contraption equipped with eight ports, each containing a specific substance or scent.

The dogs proved adept at this task. Once they had been trained, using samples provided by the U.S. Department of Agriculture and processed by the Wildlife Futures Program, the dogs responded with great specificity, passing by the not-detected samples 90-95% of the time. Their sensitivity, however, was not as strong, alerting to just 40% of the positive samples. Overall, the researchers found that the dogs spent more time at the ports containing positive samples than those with not-detected samples, suggesting that they perceived a difference even if they didn’t always produce the trained response, such as a bark or sitting down when they smelled the positive sample.

Moving toward a more naturalistic setting, the researchers then experimented with having the dogs and their handlers try to discern CWD-positive samples placed throughout a large, privately owned field. To avoid contaminating the soil or having the dogs come in contact with the samples, two-gram samples of feces were placed in jars with mesh lids to allow the odor to waft out and then partially buried in the ground in different areas.

The researchers observed that the dogs responded to the positive samples more often than the not-detect samples in the field trial. In total, they detected eight of 11 positive samples in the field, with a false negative rate of 13%. Both handlers and dogs seemed to improve as they went, their accuracy increasing after their first field search.

“Given the amount of time that we trained these dogs and the novel environment, not to mention the fact that these are pet dogs and not trained search dogs, our results are promising,” says Mallikarjun. “As we move forward and work with dogs that are specifically trained to search in a field setting and devote their entire lives to detecting this odor, they are going to do an even better job.”

That’s a step the Wildlife Futures Program is already taking, with canine handlers training “professional” detection dogs how to canvas fields and forests, searching for CWD.

The researchers believe that, while dogs don’t represent a silver bullet in the fight against CWD, they may prove useful as an early warning system, helping fill gaps in knowledge from other monitoring systems and management approaches.

“These dogs could increase the odds of catching an outbreak early,” says Lisa Murphy, a study co-author and co-director of the Wildlife Futures Program.

The Penn Vet team is also collaborating with other groups not only to work with detection dogs but also to identify the odor dogs may be responding to in order to develop other systems for early detection. The lessons learned could be broadly useful.

“If we’re able to tap into what we’ve learned with chronic wasting disease and apply it to other issues in agriculture and conservation, these dogs could be a major asset,” Otto says.

Amritha Mallikarjun is a postdoctoral fellow in the University of Pennsylvania School of Veterinary Medicine.

Lisa Murphy is resident director of PADLS New Bolton Center, a professor of toxicology, associate director of the Institute for Infectious and Zoonotic Diseases, and co-director of the Wildlife Futures Program at Penn’s School of Veterinary Medicine.

Cynthia Otto is a professor of working dog sciences and sports medicine and director of the Working Dog Center in Penn’s School of Veterinary Medicine.

Mallikarjun, Murphy, and Otto’s coauthors were Penn Vet’s Ben Swartz, Sarah A. Kane, Michelle Gibison, Isabella Wilson, Amanda Collins, Madison B. Moore, Ila Charendoff, and Julie Ellis and the U.S. Department of Agriculture’s Tracy Nichols. Mallikarjun is corresponding author on the study.

The work was supported by the Pennsylvania Department of Agriculture and the Wildlife Futures Program at the University of Pennsylvania School of Veterinary Medicine.

Researchers in the lab of Rice’s Jeffrey Hartgerink have figured out how to 3D-print the well-defined structures using a self-assembling peptide ink. “Eventually, the goal is to print structures with cells and grow mature tissue in a petri dish. These tissues can then be transplanted to treat injuries, or used to learn about how an illness works and to test drug candidates,” said Adam Farsheed, a Rice bioengineering graduate student and lead author of the study, which appeared in Advanced Materials.

“There are 20 naturally occurring amino acids that make up proteins in the human body,” Farsheed said. “Amino acids can be linked together into larger chains, like Lego blocks. When amino acid chains are longer than 50 amino acids, they are called proteins, but when these chains are shorter than 50 amino acids they are called peptides. In this work, we used peptides as our base material in our 3D-printing inks.”

Developed by Hartgerink and collaborators, these “multidomain peptides” are designed to be hydrophobic on one side and hydrophilic on the other. When placed in water, “one of the molecules will flip itself on top of another, creating what we call a hydrophobic sandwich,” Farsheed said.

These sandwiches stack onto one another and form long fibers, which then form a hydrogel, a water-based material with a gelatinous texture that can be useful for a wide range of applications such as tissue engineering, soft robotics and wastewater treatment.

Multidomain peptides have been used for nerve regeneration, cancer treatment and wound healing, and have been shown to promote high levels of cell infiltration and tissue development when implanted in living organisms.

“We know that the multidomain peptides can safely be implanted in the body,” Farsheed said. “But what I was looking to do in this project was to go in a different direction and show that these peptides are a great 3D-printing ink.

“It might be counterintuitive since our material is so soft, but I recognized that our multidomain peptides are an ideal ink candidate because of the way they self-assemble,” he continued. “Our material can reassemble after being deformed, similar to how toothpaste forms a nice fiber when pushed out of a tube.”

Farsheed’s mechanical engineering background allowed him to take an unconventional approach when testing his hypothesis.

“I had more of a brute-force engineering approach where instead of chemically modifying the material to make it more amenable to 3D printing, I tested to see what would happen if I simply added more material,” he said. “I increased the concentration about fourfold, and it worked extremely well.

“There have been only a handful of attempts to 3D-print using other self-assembling peptides, and that work is all great, but this is the first time that any self-assembling peptide system has been used to successfully 3D-print such complex structures,” Farsheed continued.

The structures were printed with either positively charged or negatively charged multidomain peptides, and immature muscle cells placed on the structures behaved differently depending on the charge. Cells remained balled up on the substrate with a negative charge, while on the positively charged material the cells spread out and began to mature.

“It shows that we can control cell behavior using both structural and chemical complexity,” Farsheed said.

Hartgerink is a professor of chemistry and bioengineering and associate chair for undergraduate studies. Farsheed is a bioengineering graduate student and lead author on the study. Additional study co-authors are undergraduate student Adam Thomas and graduate student Brett Pogostin.

The National Institutes of Health (R01 DE021798) and the National Science Foundation Graduate Research Fellowships Program supported the research.

In a new study Professor Nick Wilson, from the University of Otago and independent researcher Dr Matt Boyd, from Adapt Research in New Zealand, say five island nations, including New Zealand, could be well placed to continue to produce food despite the reduced sunlight and cooler temperatures caused by soot in the atmosphere following a nuclear war in the Northern Hemisphere. Australia (an island continent), Iceland, Vanuatu and the Solomon Islands were also likely to have robust food self-sufficiency, even in an extreme nuclear winter.

Their research is published in the international journal Risk Analysis.

Professor Wilson says while New Zealand was likely to continue to be able to produce enough food, its production and distribution was still threatened by the country’s extreme dependence on imported commodities, such as refined fuel.

The researchers investigated the impact of abrupt sunlight reducing scenarios caused by nuclear war, super volcano eruptions or asteroid impacts on agricultural production globally. They applied published crop models under ‘nuclear winter’ conditions to 38 island nations, combining this with other methods to estimate the food calorie supply. They also assessed a range of resilience factors that might protect countries from the impacts of a nuclear winter.

Dr Boyd says although some other nations would likely be able to produce enough food, other factors, such as the collapse of industry and social functioning placed their resilience in doubt.

Professor Wilson says the findings are consistent with a 1980s study on the impact of nuclear war on New Zealand, although the country’s resilience has declined since then as its dependence on imported diesel and digital infrastructure has grown.

“Islands such as New Zealand are often very dependent on imports of refined liquid fuel, may lack energy self-sufficiency and are susceptible to breakdowns and shortages of critical commodities. While New Zealand could divert a high proportion of its dairy exports to supply the local market, it lacks the ability to manufacture many replacement parts for farm and food processing machinery.”

Dr Boyd says the findings of the study reinforce the precarious position many countries would find themselves in during a global catastrophe.

“New Zealand has the potential to preserve an industrial society through this kind of catastrophe, but it is not ‘plug-and-play’. A decent amount of strategic planning needs to happen and across a long period of time, but this planning would have benefits in dealing with a wide range of extreme risks.”

Dr Boyd says the findings show there is a need to analyse nuclear winter and other abrupt sunlight reducing scenarios as part of a comprehensive national risk assessment.

“We are not aware of any plan for this kind of global catastrophe, including whether priorities for rationing have been considered.

“With the Government expected to release New Zealand’s first National Security Strategy this year it is important that the catastrophic risks associated with abrupt sunlight reducing scenarios do not slip through the cracks.”