Covid jab response low for some immunosuppressed people

Some high risk patients had few or no infection-fighting antibodies in their blood, a vaccine study found.

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High Street chemists to offer free blood pressure checks

The NHS initiative, for people in England over the age of 40, could save thousands of lives.

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To understand future habitat needs for chimpanzees, look to the past

A new study provides insight into where chimpanzees (Pan troglodytes) avoided climate instability during glacial and interglacial periods in Africa over the past 120,000 years. Using bioclimatic variables and other data, the study identified previously unknown swaths of habitat, rich in figs and palms, where chimps rode out the changes seen since the Last Interglacial period.

The findings, published in the journal in the American Journal of Primatology, help to increase the understanding of how climate change impacts biodiversity, and how to mitigate against predicted biodiversity loss in the future. This research was led by the German Centre for Integrative Biodiversity Research (iDiv), the Max Planck Institute for Evolutionary Anthropology, and an international team of over 80 collaborators from research institutes across the globe.

For their analysis, the authors compiled over 130,000 occurrence records of chimpanzees stored in the A.P.E.S. database of the International Union for Conservation of Nature (IUCN) Species Survival Commission (SSC), as well as data from the Pan African Programme: The Cultured Chimpanzee (PanAf) at the MPI-EVA and iDiv, Leipzig.The researchers quantified chimpanzee habitat suitability using species distribution models based on chimpanzee occurrences, climate and human density data, and then projected these models onto temporal snapshots of climate reconstructions at up to 1000 year intervals, dating back to the Last Interglacial period (120,000 years ago). For the first time, they were able to build a dynamic model of habitat suitability over time, permitting long-term stability (i.e. glacial refugia) to be calculated.

Results show that glacial refugia across Africa may have been underestimated for chimpanzees, with potentially up to 60,000 additional square kilometers (23,166 square miles) in the Upper and Lower Guinea Forests in West and Central Africa, and the Albertine Rift in East Africa.

In addition, results provide explicit insights into chimpanzee habitat and how it may have shifted throughout time, enabling hypotheses of how global change has affected genetic and behavioral diversity to be tested in the future.

Said lead author of the study Chris Barratt, a postdoctoral researcher at iDiv: “By integrating past climate and human density estimates, as well as species richness of keystone tropical plants (figs and palms), this study provides strong evidence of glacial refugia for chimpanzees being geographically larger than previously thought. It may well be that some of these refugia deserve greater levels of protection than they currently receive as they are important for the persistence of populations and species during periods of global change.”

The results provide a new resource for understanding patterns of genetic and behavioral diversity in chimpanzees. Chimpanzees exhibit highly differentiated genetic diversity (for example, lower in West Africa and higher in East and Central Africa), as well as high levels of behavioral differentiation based on the environmental variability they are exposed to, including Pleistocene forest refugia.

Said Hjalmar Kühl at iDiv, and senior author of the study: “We are only beginning to understand how past environmental changes have influenced the diversity in great apes we find today. A better understanding of these processes will tell us when variable environments serve as engines of diversification and when not. In the end these insights into great apes will also offer insights into our own evolution.”

Said Fiona Maisels of the Wildlife Conservation Society and a co-author of the study: “To effectively conserve chimpanzees (and other species) over the centuries to come, it is essential to understand the past. Humans are changing the planet’s climate and its habitats ever more rapidly. Approaches such as those used in this study are vital for predicting how these changes will affect future wildlife abundance and distribution, and to ensure space and safety for a multitude of species.”

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Materials provided by Wildlife Conservation Society. Note: Content may be edited for style and length.

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Sustained fast rates of evolution explain how tetrapods evolved from fish

One of the biggest questions in evolution is when and how major groups of animals first evolved. The rise of tetrapods (all limbed vertebrates) from their fish relatives marks one of the most important evolutionary events in the history of life. This “fish-to-tetrapod” transition took place somewhere between the Middle and Late Devonian (~400-360 million years ago) and represents the onset of a major environmental shift, when vertebrates first walked onto land. Yet, some of the most fundamental questions regarding the dynamics of this transition have remained unresolved for decades.

In a study published August 23 in Nature Ecology and Evolution Harvard researchers establish the origin date of the earliest tetrapods and discover they acquired several of the major new adaptive traits that enabled vertebrate life on land at accelerated evolutionary rates.

The study led by Dr. Tiago R. Simões, postdoctoral researcher, and senior author Professor Stephanie E. Pierce, both from the Department of Organismic and Evolutionary Biology, Harvard University, applied recently developed statistical methods (Bayesian evolutionary analysis) to precisely estimate the time and rates of anatomical evolution during the rise of tetrapods. The Bayesian method was adapted from methods originally developed in epidemiology to study how viruses like COVID-19 evolve and only recently became a tool in paleontology for the study of species evolution.

The study also innovates by combining data from fossil footprints and body fossils to pinpoint the time of origin of the tetrapods. “Normally footprint data shows up after body fossils of their track makers. In this case, we have tetrapod footprints much older than the first body fossils by several million years, which is extremely unusual. By combining both footprint and body fossils, we could search for a more precise age for the rise of tetrapods,” said Pierce.

“We were able to provide a very precise age for the origin of tetrapods at approximately 390 million years ago, 15 million years older than the oldest tetrapod body fossil,” said Simões.

The researchers also found that most of the close relatives to tetrapods had exceptionally slow rates of anatomical evolution, suggesting the fish relatives to tetrapods were quite well adapted to their aquatic lifestyle.

“On the other hand, we discovered the evolutionary lineages leading to the first tetrapods broke away from that stable pattern, acquiring several of the major new adaptive traits at incredibly fast rates that were sustained for approximately 30 million years,” said Simões.

Simões and Pierce also extended molecular approaches to study how fast different parts of the early tetrapod body plan evolved — such as the skull, jaws, and limbs — and the strength of natural selection acting on each of them. They found that all parts of the tetrapod skeleton were under strong directional selection to evolve new adaptive features, but that the skull and jaws were evolving faster than the rest of the body, including the limbs.

“This suggest that changes in the skull had a stronger role in the initial stages of the fish-to-tetrapod transition than changes in the rest of the skeleton. The evolution of limbs to life on land was important, but mostly at a later stage in tetrapod evolution, when they became more terrestrial,” said Pierce.

“We see several anatomical innovations in their skull related to feeding and food procurement, enabling a transition from a fish-like suction-based mode of prey capture to tetrapod-like biting, and an increase in orbit size and location” said Simões. “These changes prepared tetrapods to look for food on land and to explore new food resources not available to their fish relatives.”

The researchers also found that the fast rates of anatomical evolution in the tetrapod lineage were not associated with fast rates of species diversification. In fact, there were very few species around, so few they had a very low probability of being preserved in the fossil record.

This finding helps to answer an ongoing debate in evolution of whether new major animal groups originated under fast rates of anatomical change and species diversification (the classical hypothesis). Or, if there were high rates of anatomical evolution first, with increased rates of species diversification occurring only several million years later (a new hypothesis).

“What we’ve been finding in the last couple of years is that you have lots of anatomical changes during the construction of new animal body plans at short periods of geological time, generating high rates of anatomical evolution, like we’re seeing with the first tetrapods. But in terms of number of species, they remained constrained and at really low numbers for a really long time, and only after tens of millions of years do they actually diversify and become higher in number of species. There’s definitely a decoupling there,” said Simões.

Pierce agreed, “It takes time to get a foothold in a new niche in order to take full advantage of it.”

“Our study starts at the very beginning of this evolutionary story. There are many, many more chapters to come,” said Pierce. “We want to next dig further in terms of what happened after the origin of tetrapods, when they started to colonize land and diversify into new niches. How does that impact their anatomical rates of evolution compared to their species diversification across the planet? This is just the very beginning. It’s the introductory chapter to the book.”

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Study assesses risk that fruits, vegetables sold in U.S. are products of forced labor

A new study in Nature Food calls attention to the need for better systems to track forced labor in food supply chains. The study — a methodological advance — reports on the development of a new scoring system that identifies the risk of forced labor for fruits and vegetables sold in the United States. It finds a high risk of forced labor, but also scattered and incomplete data sources that limit action.

The study, published August 23, 2021, was led by Nicole Tichenor Blackstone in the Agriculture, Food and Environment program at the Friedman School of Nutrition Science & Policy at Tufts, and Jessica Decker Sparks, who leads the Ecosystems and the Environment Programme at the University of Nottingham Rights Lab.

“Sustainability research on the food supply typically focuses on promoting human health and protecting the environment,” said first and corresponding author Blackstone. “But social sustainability provides a different perspective on our food sources, including issues of labor rights and equity. Globally, agriculture has one of the highest incidences of forced labor.”

The study developed a new forced labor risk scoring method that draws upon original data compiled by the authors as well as a range of governmental and non-profit data. The research team then coded each food and country-of-origin combination as either very high risk, high risk, medium risk, or low risk for forced labor having occurred at some point in the growing and harvesting of each item. Previously, there have been short lists of commodities suspected of being produced with forced labor, or case studies of foods produced in one country, such as Mexico.

“What we’ve done, for the first time, is to look at all of the major fruits and vegetables consumed in the U.S., as well as all of the countries these foods come from, including the U.S., and assess the possibility that somewhere in the production process forced labor could have been involved,” said Blackstone.

The scoring method is not meant to be a consumer tool but could help industry and policy makers interested in the development of systems and protocols for the responsible procurement of foods.

The final data set included 93 fruits and vegetables in 307 food-country combinations. The results of the qualitative coding show that most food-country combinations were coded as high risk (85%) for forced labor at some point. Seven percent were coded as very-high risk, 4.5% were coded as medium risk, and 3.5% were coded as low risk.

“This is an extraordinary percentage at high risk, but it reflects that there are very limited or coarse data,” said senior author Sparks. “There are major structural issues with how agricultural labor is set up that make workers vulnerable. To us, this reflects systemic issues in food supply chains that have not been addressed. Our findings point to the need for policymakers, farmers, and food companies to engage with farm workers to address the systemic issues.”

Some of the variables that factored into the scoring were:

  • documented history of forced labor for a given food in a given country;
  • a country’s record on monitoring forced labor — a good record lowered the score and vice versa; and,
  • whether a given food is harvested by hand or by machine.

Agricultural work often takes place in remote and isolated environments with demanding labor requirements. There are typically inadequate legal protections, with piece-rate pay systems tied to productivity, and reliance on migrant labor.

As defined by the International Labour Organization, “forced labour can be understood as work that is performed involuntarily and under the menace of any penalty. It refers to situations in which persons are coerced to work through the use of violence or intimidation, or by more subtle means such as manipulated debt, retention of identity papers or threats of denunciation to immigration authorities.”

“Forced labor in agriculture is a threat to the sustainability of food systems. However, the scarcity of data noted limits holistic analysis and action. Future research should prioritize data and model development to enable analyses of forced labor and other labor-related social risks (e.g., wages, child labor) across the life cycles of a wide range of foods. These efforts can help ensure that the rights and dignity of “the hands that feed us” are centered in the transformation of food systems,” concluded the authors in the study.

Authors and Funding

Additional authors of the study are Catherine Benoit Norris of NewEarth B, Bethany Jackson of the Rights Lab and School of Geography at the University of Nottingham, and Tali Robbins, who was a master’s degree student at the Friedman School at the time of the study.

Jessica Decker Sparks was supported by the Nottingham Research Fellowship, University of Nottingham, and Tali Robbins was supported by the Friedman School. Please see the study for conflicts of interest.

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Covid returns to top 10 causes of death

Covid-19 was the ninth biggest cause of death in England in July.

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UK orders 35 million more Pfizer vaccine doses

The government say it is preparing for Covid boosters to protect the most vulnerable this year.

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Coronavirus: Young long Covid sufferers lead vaccine drive

The government says it has met its target to offer all 16 and 17-year-olds in England a vaccine.

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Covid: Antibody tests offered to public for first time

The UK-wide scheme for adults who test positive for coronavirus will launch next week.

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Here comes the Sun: Planetary scientists find evidence of solar-driven change on the Moon

Tiny iron nanoparticles unlike any found naturally on Earth are nearly everywhere on the Moon — and scientists are trying to understand why. A new study led by Northern Arizona University doctoral candidate Christian J. Tai Udovicic, in collaboration with associate professor Christopher Edwards, both of NAU’s Department of Astronomy and Planetary Science, uncovered important clues to help understand the surprisingly active lunar surface. In an article recently published in Geophysical Research Letters, the scientists found that solar radiation could be a more important source of lunar iron nanoparticles than previously thought.

Asteroid impacts and solar radiation affect the Moon in unique ways because it lacks the protective magnetic field and atmosphere that protect us here on Earth. Both asteroids and solar radiation break down lunar rocks and soil, forming iron nanoparticles (some smaller, some larger) that are detectable from instruments on satellites orbiting the Moon. The study used data from National Aeronautics and Space Administration (NASA) and Japan Aerospace Exploration Agency (JAXA) spacecraft to understand how quickly iron nanoparticles form on the Moon over time.

“We have thought for a long time that the solar wind has a small effect on lunar surface evolution, when in fact it may be the most important process producing iron nanoparticles,” Tai Udovicic said. “Since iron absorbs a lot of light, very small amounts of these particles can be detected from very far away — making them a great indicator of change on the Moon.”

Surprisingly, the smaller iron nanoparticles seemed to form at a similar rate as radiation damage in samples returned from the Apollo missions to the Moon, a hint that the Sun has a strong influence in their formation.

“When I saw the Apollo sample data and our satellite data side by side for the first time, I was shocked,” Tai Udovicic said. “This study shows that the solar radiation could have a much larger influence in active change on the Moon than previously thought, not only darkening its surface, but it might also create small quantities of water usable in future missions.”

As NASA prepares to land the first woman and the next man on the surface of the Moon by 2024 as part of the Artemis mission, understanding the solar radiation environment and possible resources on the Moon are critical. In future work recently awarded a NASA Future Investigators in Space Science and Technology (FINESST) grant, Tai Udovicic plans to broaden his targeted study to the entire Moon, but is also eager to take a closer look at mysterious lunar swirls, one of which was recently selected as a landing site for the upcoming Lunar Vertex rover. He also studies lunar temperatures and water ice stability to inform future missions.

“This work helps us understand, from a bird’s eye view, how the lunar surface changes over time,” said Tai Udovicic. “While there is still a lot to learn, we want to make sure that when we have boots back on the Moon, that those missions are backed by the best science available. It’s the most exciting time to be a lunar scientist since the tail end of the Apollo era in the 70s.”

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Materials provided by Northern Arizona University. Note: Content may be edited for style and length.

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