Pest-killing fungi could protect NYS grapes, apples from invasive insect

Cornell University-led research reports that two local fungal pathogens could potentially curb an invasive insect that has New York vineyard owners on edge.

The spotted lanternfly feeds on more than 70 plant species, including grape vines and apple trees.

Now, the paper, “A pair of native fungal pathogens drives decline of a new invasive herbivore,” led by Eric Clifton, a postdoctoral researcher in the lab of Cornell professor of entomology and co-author Ann Hajek, describes how two unrelated fungi — Batkoa major and Beauveria bassiana — have been decimating spotted lanternfly populations near Reading, Pennsylvania.

“The finding is important because these naturally-occurring pathogens could be used to develop methods for more environmentally-friendly control of this damaging invader,” Hajek said.

“It’s a great example of how a major new invasive herbivore can be suppressed by native pathogens,” Clifton said. “Nobody stepped in to do this; it all happened naturally.”

Native to China, Taiwan and Vietnam, the spotted lanternfly was first discovered in southeastern Pennsylvania in 2014 and has spread to seven more states. Adult insects occasionally have been sighted in New York, but there are no signs yet of large populations. Entomologists and growers believe it’s just a matter of time before spotted lanternflies settle in New York, which boasts a nearly $5 billion grape, grape juice and wine industry, and also stands as the country’s second-largest apple producing state. In Pennsylvania, spotted lanternflies damaged at least a half-dozen vineyards from 2017 to 2018. While there are no reports of spotted lanternflies infecting apple orchards in the U.S., the insects have damaged apples in Korea.

In late 2017 Clifton and Hajek began responding to reports of fungi killing the insects in Berks County, Pennsylvania. In early October 2018, they investigated a site near an apple orchard. “It was clear anywhere you walked, you’d see dozens of lanternflies killed by Beauveria on the ground, and then you’d see cadavers all over the trees killed by Batkoa,” Clifton said.

Back at the lab, the researchers used genetic techniques to identify the two fungi. They found that 97 percent of lanternflies on tree trunks were killed by B. major, while on the ground 51 percent of cadavers were killed by B. bassiana and the rest by B. major.

“If you like apples, if you like grapes and wine, if you like beer (which requires hops, another plant eaten by spotted lanternflies), spotted lanternflies can attack those, and that has growers worried,” Clifton said.

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Materials provided by Cornell University. Note: Content may be edited for style and length.

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Making glass more clear

Not everything about glass is clear. How its atoms are arranged and behave, in particular, is startlingly opaque.

The problem is that glass is an amorphous solid, a class of materials that lies in the mysterious realm between solid and liquid. Glassy materials also include polymers, or commonly used plastics. While it might appear to be stable and static, glass’ atoms are constantly shuffling in a frustratingly futile search for equilibrium. This shifty behavior has made the physics of glass nearly impossible for researchers to pin down.

Now a multi-institutional team including Northwestern University, North Dakota State University and the National Institute of Standards and Technology (NIST) has designed an algorithm with the goal of giving polymeric glasses a little more clarity. The algorithm makes it possible for researchers to create coarse-grained models to design materials with dynamic properties and predict their continually changing behaviors. Called the “energy renormalization algorithm,” it is the first to accurately predict glass’ mechanical behavior at different temperatures and could result in the fast discovery of new materials, designed with optimal properties.

“The current process of materials discovery can take decades,” said Northwestern’s Sinan Keten, who co-led the research. “Our approach scales molecular simulations up by roughly a thousand times, so we can design materials faster and examine their behavior.”

“Although glassy materials are all around us, scientists still struggle to understand their properties, such as their fluidity and diffusion as temperature or composition vary,” said Jack F. Douglas, a NIST research fellow, who co-led the work with Keten. “This lack of understanding is a serious limitation in the rational design of new materials.”

The study published recently in the journal Science Advances. Wenjie Xia, an assistant professor of civil and environmental engineering at North Dakota State University, was the paper’s first author.

Glass’ strange behavior stems from the way it is made. It starts as a hot pool of molten material that is then rapidly cooled. Although the final material wants to reach equilibrium in a cooled state, it is highly susceptible to changing temperatures. If the material is heated, its mechanical properties can change dramatically. This makes it difficult for researchers to efficiently predict the mechanical properties by using existing molecular simulation techniques.

“As simple as glass looks, it’s a very strange material,” said Keten, an associate professor of mechanical engineering and civil and environmental engineering in Northwestern’s McCormick School of Engineering. “It is amorphous and doesn’t have an equilibrium structure, so it’s constantly evolving by slow movements of its molecules. And then there is a lot of variation in how it evolves depending on temperature and molecular features of each glassy material. These processes take a very long time to compute in molecular simulations. Speeding up computations is only possible if we can map the positions of the molecules to simpler structural models.”

Glass’ structure is in stark contrast to a crystalline solid, in which atoms are arranged in an ordered, predictable and symmetrical manner. “It’s easy to map atoms in crystalline materials because they have a repeating structure,” Keten explained. “Whereas in an amorphous material, it is difficult to map the structure due to the lack of long-range order.”

“Because of the amorphous and disordered nature of glass, its properties could vary with temperature substantially, making the prediction of its physical behavior extremely difficult,” Xia added. “Now, we have found a new way to solve this problem.”

To address this challenge, Keten, Douglas, Xia and their collaborators designed their algorithm to factor in the many ways glass molecules would move or not move depending on varying temperatures over time. To calculate the position of each atom within glass would be painstakingly slow and tedious — even for a high-powered algorithm — to compute. So Keten and his collaborators used “coarse-grained modeling,” a simplified approach that looks at clusters of atoms rather than single atoms. Their new methodology efficiently creates parameters for the interactions among these coarser particles so that the model can capture the dramatic slow-down in molecular motion as the glassy material cools down.

“We cannot do an atom-by-atom simulation for even glass films of nanoscale thickness because even that would be too large,” Keten said. “That’s still millions of molecules. The coarse-grained models allow us to study larger systems comparable to experiments done in the lab.”

So far, Keten and his team have checked their algorithm against three already well-characterized and very different types of polymeric glass-forming liquids. In each case, the algorithm accurately predicts the known dynamic properties across a large range of temperatures.

“Explaining the physics of glasses has famously been one of the biggest problems that scientists haven’t been able to solve,” Keten said. “We’re getting closer to understanding their behavior and solving the mystery.”

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Health24.com | FDA takes up decades-long debate over breast implant safety

US health officials are taking another look at the safety of breast implants, the latest review in a decades-long debate.

Experts for the Food and Drug Administration will hear from researchers, plastic surgeons and implant makers at a two-day meeting. Women who believe their implants caused a variety of long-term diseases and ailments are also scheduled to speak.

No new restrictions or warnings

The FDA is grappling with how to manage a recently confirmed link to a rare cancer and thousands of unconfirmed complaints of other health problems.

FDA’s experts will recommend next steps and additional areas for research on the devices. But for now the agency isn’t proposing any new restrictions or warnings.

Roughly 400 000 women receive breast implants in the US annually, for cosmetic or reconstructive purposes after breast cancer.

Image credit: iStock

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Gosport hospital deaths: Police launch new inquiry

An inquiry found more than 450 patients died after being given painkillers at Gosport hospital.

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Lives have been ruined – contaminated blood victims

Those infected speak about their struggles as the public inquiry into the scandal begins.

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New type of dementia identified

Experts say the dementia discovery – the most important for years – could help find new, effective treatments.

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Health24.com | AI takes aim at lung cancer screening

The term artificial intelligence (AI) might bring to mind robots or self-driving cars. But one group of researchers is using a type of AI to improve lung cancer screening.

Screening is important for early diagnosis and improved survival odds, but the current lung cancer screening method has a 96% false positive rate.

Procedures mostly unnecessary

But in the new study, investigators were able to reduce false findings of lung cancer without missing any actual cases.

A low-dose CT scan is the standard diagnostic test for people at high risk of lung cancer. In the United States, about one-quarter of these scans reveal shadows indicating nodules in the lung. Despite that positive result, fewer than 4% of those patients actually have cancer.

“A positive test creates anxiety, increases health care costs, and the follow-up tests are not risk-free,” said study co-author Panayiotis Benos. He’s vice chairman of computational and systems biology at the University of Pittsburgh.

“For the 96% of people who have benign nodules, these procedures are unnecessary. So, we try to mine the data to tell which are benign and which are malignant,” Benos explained in a university news release.

Benos and his colleagues entered CT scan data from 218 high-risk patients into a machine learning algorithm – a form of artificial intelligence – to create a model that calculates the probability of cancer.

Leading cause of cancer death

The researchers then compared the model’s results against the patients’ actual diagnoses. The model would have spared 30% of patients with benign nodules from further, unnecessary tests, without missing a single case of cancer, the team reported.

According to the study authors, they were able to rule out cancer in about one-third of the patients. This means these people wouldn’t need biopsies, PET scans or short-interval CT scans. They could just make an appointment to come back in a year.

This is the first time artificial intelligence has been used in this way, the researchers said.

The study was published in the journal Thorax.

According to the American Cancer Society, lung cancer is the leading cause of cancer death among both men and women. This year, in the United States, the society estimates that there will be about 228 000 new cases of lung cancer and about 143 000 lung cancer deaths.

Image credit: iStock

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Health24.com | Hospital privacy curtains could be breeding ground for germs

Privacy curtains in hospital rooms might offer patients some personal dignity, but they can also harbour dangerous, drug-resistant bacteria.

That’s the claim of a new study where researchers took more than 1 500 samples from privacy curtains in 625 rooms at six skilled nursing facilities in Michigan. The samples were collected from the parts of the curtains touched most often. Samples were also gathered from patients.

Routine contamination

Sampling was done when patients were admitted, and again after 14 days and 30 days, and then monthly up to six months, when possible.

The findings showed that 22% of the samples from the privacy curtains tested positive for multidrug-resistant organisms, with contamination rates ranging from 12% to 28.5%, depending on the facility.

Of those samples, nearly 14% were contaminated with vancomycin-resistant enterococci (VRE), 6% with resistant gram-negative bacilli, and about 5% with methicillin-resistant Staphylococcus aureus (MRSA).

“We were surprised to see that multidrug-resistant organisms, especially VRE, shed by patients routinely contaminate their privacy curtains. These pathogens on privacy curtains often survive and have the potential to transfer to other surfaces and patients,” the study authors wrote.

In fact, the same resistant germs were detected on patients and their privacy curtain in nearly 16% of the sampling visits, the researchers found.

A global issue

“Patient colonisation with MRSA and VRE were each associated with contamination of the bedside curtain,” according to Dr Lona Mody and colleagues at the University of Michigan Medical Center.

Where six-month data could be collected, curtain contamination was often intermittent, the investigators found.

The findings were scheduled for presentation this week at the European Congress of Clinical Microbiology & Infectious Diseases, in Amsterdam. Research presented at meetings should be considered preliminary until published in a peer-reviewed journal.

Based on the findings, the researchers said that drug-resistant germ contamination of privacy curtains is common, as is patient/curtain co-contamination.

“As privacy curtains are used all over the world, it’s a global issue,” Mody and colleagues explained in a meeting news release. “Further studies are needed to determine conclusively whether contaminated privacy curtains are a source of multidrug-resistant organism transmission to patients.”

Image credit: iStock

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Four Seasons Health Care goes into administration

Four Seasons Health Care appoints administrators after struggling with its debts.

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Face and genitals ‘not for presumed donation’

Some body parts should be excluded from the new system of presumed consent organ donation, say experts.

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